| S. no. | Title | Authors | Citation | First author | Publication | Year | Date | DOI |
|---|---|---|---|---|---|---|---|---|
| 1 |
Physical Principles of Size and Frequency Scaling of Active Cytoskeletal Spirals |
Soni A., Yadav S.A., Athale C.A. |
Soni Aman |
ArXiV |
submitted |
submitted |
||
| 2 |
Coin-tossing by Kinesin-1 Head and
Tail Binding Collectively Drives Microtubule
Patterns |
Basu J, Singh K, Jannasch A and Athale
CA |
2025.08.18.670853 |
Basu Jashaswi |
BioRXiV |
submitted |
submitted |
https://doi.org/10.1101/2025.08.18.670853 |
| S. no. | Title | Authors | Citation | First author | Publication | Year | Date | DOI |
|---|---|---|---|---|---|---|---|---|
| 1 |
Kale T, Dasgupta R, Inamdar MM, Athale CA. |
Mol Biol Cell. 2025 Aug 28:mbcE24120543. doi: 10.1091/mbc.E24-12-0543. Online ahead of print. |
Kale Tanvi |
Mol Biol Cell |
2025 |
2025/08/28 |
10.1091/mbc.E24-12-0543 |
|
| 2 |
Khatri D, Negi P, Athale CA. |
NPJ Syst Biol Appl. 2025 Aug 23;11(1):97. doi: 10.1038/s41540-025-00566-2. |
Khatri Dhruv |
NPJ Syst Biol Appl |
2025 |
2025/08/23 |
10.1038/s41540-025-00566-2 |
|
| 3 |
Kale T, Pednekar R, Cazaux SM, Letelier VF, Vigar JRJ, Federici F, Pardee K, Athale CA. |
ACS Synth Biol. 2025 Jun 20;14(6):1920-1930. doi: 10.1021/acssynbio.4c00861. Epub 2025 May 29. |
Kale Tanvi |
ACS Synth Biol |
2025 |
2025/05/29 |
10.1021/acssynbio.4c00861 |
|
| 4 |
Physical effects of crowdant size and concentration on collective microtubule polymerization |
Basu J, Soni A, Athale CA. |
Biophys J. 2025 Mar 4;124(5):789-806. doi: 10.1016/j.bpj.2025.01.020. Epub 2025 Jan 29. |
Basu Jashaswi |
Biophys J |
2025 |
2025/01/31 |
10.1016/j.bpj.2025.01.020 |
| 5 |
KnotResolver: tracking self-intersecting filaments in microscopy using directed graphs |
Khatri D, Yadav SA, Athale CA. |
Bioinformatics. 2024 Sep 2;40(9):btae538. doi:
10.1093/bioinformatics/btae538. and ArXiV |
Khatri Dhruv |
Bioinformatics |
2024 |
2024/09/03 |
10.1093/bioinformatics/btae538 |
| 6 |
Basu J, Athale CA. |
Cytoskeleton (Hoboken). 2025 Apr;82(4):242-259. doi: 10.1002/cm.21923. Epub 2024 Sep 2. |
Basu Jashaswi |
Cytoskeleton (Hoboken) |
2025 |
2024/09/02 |
10.1002/cm.21923 |
|
| 7 |
Kale T, Khatri D, Basu J, Yadav SA, Athale CA. |
J Microsc. 2024 Nov;296(2):162-168. doi: 10.1111/jmi.13295. Epub 2024 Apr 4. |
Kale Tanvi |
J Microsc |
2024 |
2024/04/04 |
10.1111/jmi.13295 |
|
| 8 |
Wave-like oscillations of clamped microtubules driven by collective dynein transport |
Yadav SA, Khatri D, Soni A, Khetan N, Athale CA. |
Biophys J. 2024 Feb 20;123(4):509-524. doi: 10.1016/j.bpj.2024.01.016. Epub 2024 Jan 22. |
Yadav Shivani A. |
Biophys J |
2024 |
2024/01/23 |
10.1016/j.bpj.2024.01.016 |
| 9 |
Kale T, Khatri D, Athale CA. |
Phys Biol. 2023 Jun 20;20(4). doi: 10.1088/1478-3975/acdcda. |
Kale Tanvi |
Phys Biol |
2023 |
2023/06/08 |
10.1088/1478-3975/acdcda |
|
| 10 |
Khatri D, Brugière T, Athale CA, Delattre M. |
Mol Biol Cell. 2022 May 15;33(6):ar61. doi: 10.1091/mbc.E21-10-0532. Epub 2022 Mar 2. |
Khatri Dhruv |
Mol Biol Cell |
2022 |
2022/03/02 |
10.1091/mbc.E21-10-0532 |
|
| 11 |
Jain K, Basu J, Roy M, Yadav J, Patil S, Athale CA. |
Cytoskeleton (Hoboken). 2021 Sep;78(9):436-447. doi: 10.1002/cm.21694. Epub 2022 Mar 8. |
Jain Kunalika |
Cytoskeleton (Hoboken) |
2021 |
2022/03/02 |
10.1002/cm.21694 |
|
| 12 |
Self-organized optimal packing of kinesin-5-driven microtubule asters scales with cell size |
Khetan N, Pruliere G, Hebras C, Chenevert J, Athale CA. |
J Cell Sci. 2021 May 15;134(10):jcs257543. doi: 10.1242/jcs.257543. Epub 2021 Jun 3. |
Khetan Neha |
J Cell Sci |
2021 |
2021/06/03 |
10.1242/jcs.257543 |
| 13 |
Jain K, Khetan N, Yadav SA, Palani S, Athale CA. |
Yeast. 2021 Jun;38(6):352-366. doi: 10.1002/yea.3552. Epub 2021 Feb 27. |
Jain Kunalika |
Yeast |
2021 |
2021/02/06 |
10.1002/yea.3552 |
|
| 14 |
Quantifying Intracellular Particle Flows by DIC Object Tracking |
Chaphalkar AR, Jawale YK, Khatri D, Athale CA. |
Biophys J. 2021 Feb 2;120(3):393-401. doi: 10.1016/j.bpj.2020.12.013. Epub 2021 Jan 11. |
Chaphalkar Anushree R. |
Biophys J |
2021 |
2020/12/28 |
10.1016/j.bpj.2020.12.013 |
| 15 |
Aster swarming by symmetry breaking of cortical dynein transport and coupling kinesins |
Khetan N, Athale CA. |
Soft Matter. 2020 Sep 30;16(37):8554-8564. doi: 10.1039/d0sm01086c. |
Khetan Neha |
Soft Matter |
2020 |
2020/08/26 |
10.1039/d0sm01086c |
| 16 |
Modeling the tunability of the dual-feedback genetic oscillator |
Joshi YJ, Jawale YK, Athale CA. |
Phys Rev E. 2020 Jan;101(1-1):012417. doi: 10.1103/PhysRevE.101.012417. |
Joshi Yash J |
Phys Rev E |
2020 |
2020/02/20 |
10.1103/PhysRevE.101.012417 |
| 17 |
Collective effects of yeast cytoplasmic dynein based microtubule transport |
Jain K , Khetan N , Athale CA . |
Soft Matter. 2019 Feb 13;15(7):1571-1581. doi: 10.1039/c8sm01434e. |
Jain Kunalika |
Soft Matter |
2019 |
2019/01/22 |
10.1039/c8sm01434e |
| 18 |
Open Source 3D-printed focussing mechanism for cellphone-based cellular microscopy |
Jawale YK, Rapol U, Athale CA. |
J Microsc. 2019 Feb;273(2):105-114. doi: 10.1111/jmi.12765. Epub 2018 Nov 12. |
Jawale Yash K |
J Microsc |
2019 |
2018/11/13 |
10.1111/jmi.12765 |
| 19 |
Role of spatial inhomogenity in GPCR dimerisation predicted by receptor association-diffusion models |
Deshpande SA, Pawar AB, Dighe A, Athale CA, Sengupta D. |
Phys Biol. 2017 May 23;14(3):036002. doi: 10.1088/1478-3975/aa6b68. |
Deshpande Sneha A |
Phys Biol |
2017 |
2017/05/24 |
10.1088/1478-3975/aa6b68 |
| 20 |
Threshold effect of growth rate on population variability of Escherichia coli cell lengths |
Gangan MS, Athale CA. |
R Soc Open Sci. 2017 Feb 22;4(2):160417. doi: 10.1098/rsos.160417. eCollection 2017 Feb. |
Gangan Manasi S |
R Soc Open Sci |
2017 |
2017/04/08 |
10.1098/rsos.160417 |
| 21 |
Chaphalkar AR, Jain K, Gangan MS, Athale CA. |
PLoS One. 2016 Dec 19;11(12):e0167620. doi: 10.1371/journal.pone.0167620. eCollection 2016. |
Chaphalkar Anushree R |
PLoS One |
2016 |
2016/12/20 |
10.1371/journal.pone.0167620 |
|
| 22 |
Khetan N, Athale CA. |
PLoS Comput Biol. 2016 Oct 5;12(10):e1005102. doi: 10.1371/journal.pcbi.1005102. eCollection 2016 Oct. |
Khetan Neha |
PLoS Comput Biol |
2016 |
2016/10/06 |
10.1371/journal.pcbi.1005102 |
|
| 23 |
What can simulations tell us about GPCRs: Integrating the scales |
Sengupta D, Joshi M, Athale CA, Chattopadhyay A. |
Methods Cell Biol. 2016;132:429-52. doi: 10.1016/bs.mcb.2015.11.007. Epub 2015 Dec 24. |
Sengupta Durba |
Methods Cell Biol |
2016 |
2016/03/02 |
10.1016/bs.mcb.2015.11.007 |
| 24 |
Thermodynamic and kinetic characterization of transmembrane helix association |
Pawar AB, Deshpande SA, Gopal SM, Wassenaar TA, Athale CA, Sengupta D. |
Phys Chem Chem Phys. 2015 Jan 14;17(2):1390-8. doi: 10.1039/c4cp03732d. Epub 2014 Nov 26. |
Pawar Aiswarya B |
Phys Chem Chem Phys |
2015 |
2014/11/27 |
10.1039/c4cp03732d |
| 25 |
Collective behavior of minus-ended motors in mitotic microtubule asters gliding toward DNA |
Athale CA, Dinarina A, Nedelec F, Karsenti E. |
Phys Biol. 2014 Feb;11(1):016008. doi: 10.1088/1478-3975/11/1/016008. Epub 2014 Jan 29. |
Athale Chaitanya A |
Phys Biol |
2014 |
2014/01/31 |
10.1088/1478-3975/11/1/016008 |
| 26 |
Spatial and temporal sensing limits of microtubule polarization in neuronal growth cones by intracellular gradients and forces |
Mahajan S, Athale CA. |
Biophys J. 2012 Dec 19;103(12):2432-45. doi: 10.1016/j.bpj.2012.10.021. Epub 2012 Dec 18. |
Mahajan Saurabh |
Biophys J |
2012 |
2012/12/25 |
10.1016/j.bpj.2012.10.021 |
| 27 |
Population length variability and nucleoid numbers in Escherichia coli |
Athale CA, Chaudhari H. |
Bioinformatics. 2011 Nov 1;27(21):2944-8. doi: 10.1093/bioinformatics/btr501. Epub 2011 Sep 19. |
Athale Chaitanya A |
Bioinformatics |
2011 |
2011/09/21 |
10.1093/bioinformatics/btr501 |
| 28 |
Regulation of microtubule dynamics by reaction cascades around chromosomes |
Athale CA, Dinarina A, Mora-Coral M, Pugieux C, Nedelec F, Karsenti E. |
Science. 2008 Nov 21;322(5905):1243-7. doi: 10.1126/science.1161820. Epub 2008 Oct 23. |
Athale Chaitanya A |
Science |
2008 |
2008/10/25 |
10.1126/science.1161820 |
| 29 |
Development of a three-dimensional multiscale agent-based tumor model: simulating gene-protein interaction profiles, cell phenotypes and multicellular patterns in brain cancer |
Zhang L, Athale CA, Deisboeck TS. |
J Theor Biol. 2007 Jan 7;244(1):96-107. doi: 10.1016/j.jtbi.2006.06.034. Epub 2006 Jul 27. |
Zhang Le |
J Theor Biol |
2007 |
2006/09/05 |
10.1016/j.jtbi.2006.06.034 |
| 30 |
The effects of EGF-receptor density on multiscale tumor growth patterns |
Athale CA, Deisboeck TS. |
J Theor Biol. 2006 Feb 21;238(4):771-9. doi: 10.1016/j.jtbi.2005.06.029. Epub 2005 Aug 26. |
Athale Chaitanya A |
J Theor Biol |
2006 |
2005/08/30 |
10.1016/j.jtbi.2005.06.029 |
| 31 |
Inferring a system model of subcellular topoisomerase II beta localization dynamics |
Athale CA, Christensen MO, Eils R, Boege F, Mielke C. |
OMICS. 2004 Summer;8(2):167-75. doi: 10.1089/1536231041388339. |
Athale Chaitanya A |
OMICS |
2004 |
2004/07/23 |
10.1089/1536231041388339 |